Obligatory courses for 2nd year Bioinformatics (course group defined by Faculty of Mathematics, Informatics, and Mechanics)
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2024Z - Winter semester 2024/25 2024L - Summer semester 2024/25 2025Z - Winter semester 2025/26 2025L - Summer semester 2025/26 (there could be semester, trimester or one-year classes) |
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2024Z | 2024L | 2025Z | 2025L | |||||||
1000-712ASD | n/a |
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Classes
Summer semester 2024/25
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Brief description
Algorithm design and analysis. Survey of fundamental algorithms and data structures. Improving practical programming and algorithm development skills. Applying ready to use libraries of algorithms and data structures. |
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1000-711BI1 |
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Classes
Winter semester 2024/25
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Brief description
The lecture and the accompanying computer lab are intended for students of the second year of the macro-course "Bioinformatics and Systems Biology" and for the third year of "Molecular Design and Bioinformatics". They provide the basis for the application of computer science and computational science to the analysis of genes, genomes and proteins. |
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1000-714BI2 | n/a |
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Classes
Summer semester 2024/25
Groups
Brief description
The course focuses on bioinformatics techniques used to study proteins from an evolutionary perspective. It will cover essential tools (Linux, Python) and methods for protein structure and sequence analysis. The goal of the course is to provide practical skills for performing both high-throughput analyses aimed at the diversity and evolution of entire protein families, as well as in-depth analyses of individual proteins, particularly in the context of experimental research. The course is designed for individuals interested in expanding their knowledge of programming and biological data analysis. |
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1000-713BM1 |
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Classes
Winter semester 2024/25
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Brief description
In this course students become acquainted with the basic concepts and techniques of classical and molecular genetics, genomics, and genome evolution. |
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1000-714BM2 | n/a |
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Classes
Summer semester 2024/25
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Brief description
In this course students become acquainted with the basic concepts and techniques of eukaryotic genetics and human classical and molecular genetics and genomics. |
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1000-714bMPE | n/a |
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Classes
Summer semester 2024/25
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Brief description
During the lecture, students will learn about the structure of enzymatic proteins, the mechanisms of enzymatic catalysis, and enzymatic kinetics. The classes will present techniques and methods useful in working with enzymes in vitro and in silico. |
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1000-713PPO |
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Classes
Winter semester 2024/25
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Brief description
Introduction to object-oriented programming (in Java), introduction to object-oriented software design (with UML). |
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1000-715bOTG |
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Classes
Winter semester 2024/25
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Brief description
The lecture encompasses optimization in multidimensional spaces and noncooperative game theory |
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1000-712bRPR |
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Classes
Winter semester 2024/25
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Brief description
The course is an introduction to the basic concepts and methods of the probability theory. The material includes the notion of probability, Kolmogorov’s axioms, conditional probability and independence, overview of basic discrete models of probability theory, basic discrete and continuous probability distributions, parameters of probability distributions, laws of large numbers, Central Limit Theorem, Markov chains, elements of information theory. |
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1000-714SAD | n/a |
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Classes
Summer semester 2024/25
Groups
Brief description
Introduction to basic statistical notions and tools, such as parameter estimation and hypothesis testing. Introduction to data science, covering classification and clustering methods. The Mathematics students can alternatively take the course which has a different character. |
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